STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_4040Sialic acid synthase. (334 aa)    
Predicted Functional Partners:
BVU_4043
UDP-N-acetylglucosamine 2-epimerase.
 
 
 0.996
BVU_4039
CMP-N-acetylneuraminic acid synthetase.
  
 0.984
BVU_4044
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.966
BVU_4038
Nucleotidyltransferase family protein.
 
  
 0.965
BVU_2660
Acylneuraminate cytidylyltransferase, putative.
 
 
 0.913
BVU_4045
Predicted nucleoside-diphosphate sugar epimerase.
 
  
 0.896
BVU_4041
Putative carbamoylphosphate synthase, large subunit.
 
     0.816
BVU_4042
Diaminopimelate decarboxylase.
       0.733
BVU_4037
Putative CMP-KDO synthetase.
       0.710
BVU_4035
Putative inositol monophosphatase CysQ.
       0.706
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.