STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_4085Conserved hypothetical protein. (188 aa)    
Predicted Functional Partners:
BVU_4084
Conserved hypothetical protein.
       0.793
BVU_0661
Conserved protein found in conjugate transposon.
  
     0.701
BVU_1571
Conserved protein found in conjugate transposon.
  
     0.687
BVU_0004
Putative exported protein.
  
     0.665
BVU_0209
Conserved hypothetical protein.
  
     0.622
BVU_3250
Conserved hypothetical protein.
  
  
 0.604
BVU_4066
Conserved hypothetical protein.
  
     0.584
BVU_2466
Conserved hypothetical protein.
  
     0.576
BVU_0375
Conserved hypothetical protein.
  
   
 0.561
BVU_4083
Putative alanyl dipeptidyl peptidase.
       0.548
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.