STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_4142Glycoside hydrolase family 20; Related to beta-N-acetylhexosaminidases. (668 aa)    
Predicted Functional Partners:
BVU_4141
Sialate O-acetylesterase.
     0.972
BVU_4143
Glycoside hydrolase family 33, candidate sialidase.
 
 
 0.932
BVU_4140
Sialate O-acetylesterase.
 
    0.913
BVU_4138
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase.
 
  
 
0.883
BVU_4139
Glycoside hydrolase family 2; Related to beta-mannosidases.
 
 
 0.870
BVU_4136
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase.
 
  
 
0.804
BVU_4144
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.679
BVU_2209
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase.
 
  
 
0.669
BVU_3245
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase.
 
  
 
0.654
BVU_0085
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase.
  
  
 
0.647
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.