Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDI_0642 | BDI_0643 | BDI_0642 | BDI_0643 | Putative acetyltransferase. | Conserved hypothetical protein. | 0.966 |
BDI_0642 | BDI_0644 | BDI_0642 | BDI_0644 | Putative acetyltransferase. | Putative Na+/sulphate transporter. | 0.595 |
BDI_0642 | BDI_3587 | BDI_0642 | BDI_3587 | Putative acetyltransferase. | Putative metal dependent hydrolase. | 0.628 |
BDI_0642 | BDI_3588 | BDI_0642 | BDI_3588 | Putative acetyltransferase. | Lactoylglutathione lyase. | 0.734 |
BDI_0643 | BDI_0642 | BDI_0643 | BDI_0642 | Conserved hypothetical protein. | Putative acetyltransferase. | 0.966 |
BDI_0643 | BDI_0644 | BDI_0643 | BDI_0644 | Conserved hypothetical protein. | Putative Na+/sulphate transporter. | 0.595 |
BDI_0643 | BDI_1070 | BDI_0643 | BDI_1070 | Conserved hypothetical protein. | Anaerobic cobalt chelatase CbiK. | 0.401 |
BDI_0643 | BDI_3587 | BDI_0643 | BDI_3587 | Conserved hypothetical protein. | Putative metal dependent hydrolase. | 0.517 |
BDI_0643 | BDI_3588 | BDI_0643 | BDI_3588 | Conserved hypothetical protein. | Lactoylglutathione lyase. | 0.741 |
BDI_0643 | ispF | BDI_0643 | BDI_2574 | Conserved hypothetical protein. | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). | 0.456 |
BDI_0644 | BDI_0642 | BDI_0644 | BDI_0642 | Putative Na+/sulphate transporter. | Putative acetyltransferase. | 0.595 |
BDI_0644 | BDI_0643 | BDI_0644 | BDI_0643 | Putative Na+/sulphate transporter. | Conserved hypothetical protein. | 0.595 |
BDI_1070 | BDI_0643 | BDI_1070 | BDI_0643 | Anaerobic cobalt chelatase CbiK. | Conserved hypothetical protein. | 0.401 |
BDI_3587 | BDI_0642 | BDI_3587 | BDI_0642 | Putative metal dependent hydrolase. | Putative acetyltransferase. | 0.628 |
BDI_3587 | BDI_0643 | BDI_3587 | BDI_0643 | Putative metal dependent hydrolase. | Conserved hypothetical protein. | 0.517 |
BDI_3587 | BDI_3588 | BDI_3587 | BDI_3588 | Putative metal dependent hydrolase. | Lactoylglutathione lyase. | 0.863 |
BDI_3588 | BDI_0642 | BDI_3588 | BDI_0642 | Lactoylglutathione lyase. | Putative acetyltransferase. | 0.734 |
BDI_3588 | BDI_0643 | BDI_3588 | BDI_0643 | Lactoylglutathione lyase. | Conserved hypothetical protein. | 0.741 |
BDI_3588 | BDI_3587 | BDI_3588 | BDI_3587 | Lactoylglutathione lyase. | Putative metal dependent hydrolase. | 0.863 |
ispF | BDI_0643 | BDI_2574 | BDI_0643 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). | Conserved hypothetical protein. | 0.456 |