Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
BDI_0664RNA binding protein. (81 aa)    
Predicted Functional Partners:
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
 0.726
BDI_1043
NADH:ubiquinone oxidoreductase subunit.
    
   0.508
BDI_2305
Conserved hypothetical protein.
   
   0.496
BDI_0665
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase.
       0.495
BDI_1045
NADH:ubiquinone oxidoreductase subunit.
   
   0.484
BDI_0733
Conserved hypothetical protein.
    
 
 0.472
BDI_1161
ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family.
  
 0.426
BDI_1397
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
  
 0.426
BDI_2906
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
  
 0.426
BDI_0666
Glycoside hydrolase family 92; Related to an ill-defined alpha-1,2-mannosidase.
       0.419
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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