Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BDI_0682 | BDI_0683 | Putative transport protein. | Putative multidrug resistance protein. | 0.955 |
BDI_0682 | BDI_0684 | Putative transport protein. | Conserved hypothetical protein, putative outer membrane efflux protein. | 0.944 |
BDI_0682 | BDI_0685 | Putative transport protein. | Transcriptional regulator. | 0.871 |
BDI_0683 | BDI_0682 | Putative multidrug resistance protein. | Putative transport protein. | 0.955 |
BDI_0683 | BDI_0684 | Putative multidrug resistance protein. | Conserved hypothetical protein, putative outer membrane efflux protein. | 0.952 |
BDI_0683 | BDI_0685 | Putative multidrug resistance protein. | Transcriptional regulator. | 0.813 |
BDI_0683 | BDI_0789 | Putative multidrug resistance protein. | Cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.550 |
BDI_0683 | BDI_0791 | Putative multidrug resistance protein. | Outer membrane protein, putative. | 0.573 |
BDI_0683 | BDI_0802 | Putative multidrug resistance protein. | Putative transport-related, membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.545 |
BDI_0683 | BDI_2908 | Putative multidrug resistance protein. | Multidrug resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.549 |
BDI_0683 | BDI_2935 | Putative multidrug resistance protein. | ABC transporter ATP-binding protein. | 0.589 |
BDI_0683 | BDI_3167 | Putative multidrug resistance protein. | ABC transporter ATP-binding protein. | 0.589 |
BDI_0683 | BDI_3664 | Putative multidrug resistance protein. | ABC transporter ATP-binding protein. | 0.589 |
BDI_0684 | BDI_0682 | Conserved hypothetical protein, putative outer membrane efflux protein. | Putative transport protein. | 0.944 |
BDI_0684 | BDI_0683 | Conserved hypothetical protein, putative outer membrane efflux protein. | Putative multidrug resistance protein. | 0.952 |
BDI_0684 | BDI_0685 | Conserved hypothetical protein, putative outer membrane efflux protein. | Transcriptional regulator. | 0.853 |
BDI_0684 | BDI_0789 | Conserved hypothetical protein, putative outer membrane efflux protein. | Cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.815 |
BDI_0684 | BDI_0791 | Conserved hypothetical protein, putative outer membrane efflux protein. | Outer membrane protein, putative. | 0.923 |
BDI_0684 | BDI_2908 | Conserved hypothetical protein, putative outer membrane efflux protein. | Multidrug resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.814 |
BDI_0685 | BDI_0682 | Transcriptional regulator. | Putative transport protein. | 0.871 |
page 1 of 2