Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BDI_0012 | BDI_0766 | Putative two-component system response regulator. | Putative transcriptional regulator. | 0.639 |
BDI_0012 | BDI_1248 | Putative two-component system response regulator. | Transcriptional regulator. | 0.688 |
BDI_0012 | BDI_1631 | Putative two-component system response regulator. | Putative transcriptional regulator. | 0.644 |
BDI_0012 | BDI_2773 | Putative two-component system response regulator. | Putative transcriptional regulator. | 0.468 |
BDI_0012 | BDI_3290 | Putative two-component system response regulator. | Transcriptional regulator. | 0.736 |
BDI_0765 | BDI_0766 | Two-component system sensor histidine kinase, with response regulator receiver domain. | Putative transcriptional regulator. | 0.541 |
BDI_0766 | BDI_0012 | Putative transcriptional regulator. | Putative two-component system response regulator. | 0.639 |
BDI_0766 | BDI_0765 | Putative transcriptional regulator. | Two-component system sensor histidine kinase, with response regulator receiver domain. | 0.541 |
BDI_0766 | BDI_0767 | Putative transcriptional regulator. | Choloylglycine hydrolase. | 0.528 |
BDI_0766 | BDI_1248 | Putative transcriptional regulator. | Transcriptional regulator. | 0.666 |
BDI_0766 | BDI_1631 | Putative transcriptional regulator. | Putative transcriptional regulator. | 0.607 |
BDI_0766 | BDI_1868 | Putative transcriptional regulator. | Transcriptional regulator. | 0.603 |
BDI_0766 | BDI_1923 | Putative transcriptional regulator. | Transcriptional regulator. | 0.630 |
BDI_0766 | BDI_2773 | Putative transcriptional regulator. | Putative transcriptional regulator. | 0.559 |
BDI_0766 | BDI_2989 | Putative transcriptional regulator. | Putative transcriptional regulator. | 0.647 |
BDI_0766 | BDI_3290 | Putative transcriptional regulator. | Transcriptional regulator. | 0.727 |
BDI_0767 | BDI_0766 | Choloylglycine hydrolase. | Putative transcriptional regulator. | 0.528 |
BDI_1248 | BDI_0012 | Transcriptional regulator. | Putative two-component system response regulator. | 0.688 |
BDI_1248 | BDI_0766 | Transcriptional regulator. | Putative transcriptional regulator. | 0.666 |
BDI_1248 | BDI_1631 | Transcriptional regulator. | Putative transcriptional regulator. | 0.743 |
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