STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase; Belongs to the xylose isomerase family. (442 aa)    
Predicted Functional Partners:
BDI_0782
Xylulose kinase.
 
 
 0.991
BDI_1350
Conserved hypothetical protein.
     
 0.910
BDI_3373
Glycoside hydrolase family 32, candidate levanase; Belongs to the glycosyl hydrolase 32 family.
     
 0.909
BDI_1483
Putative fructokinase.
    
 0.908
BDI_2901
Fructokinase.
    
 0.908
BDI_3374
Putative fructokinase.
    
 0.908
BDI_1250
Hexokinase type III.
     
 0.905
BDI_0625
Conserved hypothetical protein.
    
  0.900
BDI_1628
Glucokinase.
    
 0.824
BDI_1749
ROK family transcriptional repressor.
    
 0.824
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.