Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BDI_1069Putative transport-related exported protein. (793 aa)    
Predicted Functional Partners:
BDI_1068
Conserved hypothetical membrane protein.
 
  
 0.920
BDI_1067
precorrin-3B C17-methyltransferase.
       0.636
BDI_1066
precorrin-6Y C5,15-methyltransferase, decarboxylating.
       0.633
BDI_1065
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
       0.631
cbiD
precorrin-6X reductase/cobalamin biosynthetic protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
       0.595
BDI_0704
Outer membrane protein.
  
 
 0.551
BDI_1070
Anaerobic cobalt chelatase CbiK.
       0.515
BDI_2751
Hypothetical protein.
  
     0.453
BDI_1309
Outer membrane efflux protein.
  
 
 0.448
BDI_3408
Putative iron transport-related exported protein.
 
  
0.426
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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