Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BDI_0611 | BDI_1036 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.697 |
BDI_0611 | BDI_1213 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.561 |
BDI_0611 | BDI_1707 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.515 |
BDI_0611 | BDI_2669 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.508 |
BDI_0611 | BDI_3321 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.628 |
BDI_1036 | BDI_0611 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.697 |
BDI_1036 | BDI_1211 | Conserved hypothetical protein. | Putative bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase. | 0.467 |
BDI_1036 | BDI_1212 | Conserved hypothetical protein. | Hypothetical protein. | 0.414 |
BDI_1036 | BDI_1213 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.656 |
BDI_1036 | BDI_1216 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.437 |
BDI_1036 | BDI_1707 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.737 |
BDI_1036 | BDI_2669 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.769 |
BDI_1036 | BDI_3321 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.672 |
BDI_1211 | BDI_1036 | Putative bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase. | Conserved hypothetical protein. | 0.467 |
BDI_1211 | BDI_1212 | Putative bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase. | Hypothetical protein. | 0.969 |
BDI_1211 | BDI_1213 | Putative bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase. | Conserved hypothetical protein. | 0.928 |
BDI_1211 | BDI_1214 | Putative bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase. | Putative hydrolase. | 0.910 |
BDI_1211 | BDI_1215 | Putative bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase. | Putative calcineurin superfamily phosphohydrolase. | 0.525 |
BDI_1211 | BDI_1216 | Putative bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase. | Conserved hypothetical protein. | 0.512 |
BDI_1212 | BDI_1036 | Hypothetical protein. | Conserved hypothetical protein. | 0.414 |
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