STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_1323Rhamnulose kinase/L-fuculose kinase. (473 aa)    
Predicted Functional Partners:
rhaA
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
 
 
 0.997
BDI_1320
Rhamnulose-1-phosphate aldolase.
 
 
 0.994
BDI_1318
Glycoside hydrolase family 78; Related to alpha-L-rhamnosidases.
 
  
 0.895
BDI_1319
Glycoside hydrolase family 78; Related to alpha-L-rhamnosidases.
 
  
 0.773
BDI_1649
Glycoside hydrolase family 78; Related to alpha-L-rhamnosidases.
 
  
 0.735
BDI_0103
Conserved hypothetical protein.
  
  
 0.731
BDI_1321
L-rhamnose/H+ symporter.
  
  
 0.731
BDI_3139
Glycoside hydrolase family 78; Related to alpha-L-rhamnosidases.
 
  
 0.702
BDI_1324
Transcriptional regulator.
 
   
 0.662
BDI_1317
Glycoside hydrolase family 78; Distantly related to alpha-L-rhamnosidases.
 
    0.626
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.