Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BDI_1343 | BDI_1344 | Conserved hypothetical protein with a conserved domain. | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | 0.430 |
BDI_1343 | BDI_1345 | Conserved hypothetical protein with a conserved domain. | Fe-S oxidoreductase. | 0.416 |
BDI_1343 | BDI_1346 | Conserved hypothetical protein with a conserved domain. | Conserved hypothetical protein. | 0.416 |
BDI_1343 | BDI_1347 | Conserved hypothetical protein with a conserved domain. | Conserved hypothetical protein. | 0.416 |
BDI_1343 | BDI_1348 | Conserved hypothetical protein with a conserved domain. | Putative glycero-phosphotransferase. | 0.416 |
BDI_1343 | BDI_1349 | Conserved hypothetical protein with a conserved domain. | Ribulose-phosphate 3-epimerase. | 0.416 |
BDI_1343 | BDI_1350 | Conserved hypothetical protein with a conserved domain. | Conserved hypothetical protein. | 0.416 |
BDI_1343 | BDI_1351 | Conserved hypothetical protein with a conserved domain. | Nucleotidyltransferase family protein; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily. | 0.416 |
BDI_1344 | BDI_1343 | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | Conserved hypothetical protein with a conserved domain. | 0.430 |
BDI_1344 | BDI_1345 | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | Fe-S oxidoreductase. | 0.742 |
BDI_1344 | BDI_1346 | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | Conserved hypothetical protein. | 0.741 |
BDI_1344 | BDI_1347 | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | Conserved hypothetical protein. | 0.773 |
BDI_1344 | BDI_1348 | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | Putative glycero-phosphotransferase. | 0.756 |
BDI_1344 | BDI_1349 | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | Ribulose-phosphate 3-epimerase. | 0.748 |
BDI_1344 | BDI_1350 | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | Conserved hypothetical protein. | 0.746 |
BDI_1344 | BDI_1351 | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | Nucleotidyltransferase family protein; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily. | 0.748 |
BDI_1344 | BDI_1352 | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | Hypothetical protein. | 0.552 |
BDI_1344 | BDI_1353 | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | Putative polysaccharide transporter/flippase. | 0.570 |
BDI_1345 | BDI_1343 | Fe-S oxidoreductase. | Conserved hypothetical protein with a conserved domain. | 0.416 |
BDI_1345 | BDI_1344 | Fe-S oxidoreductase. | Glycosyltransferase family 2; Related to beta-glycosyltransferases. | 0.742 |
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