STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_1453Conserved hypothetical protein. (317 aa)    
Predicted Functional Partners:
BDI_1454
Conserved hypothetical protein.
 
   
 0.948
BDI_1456
Conserved hypothetical protein.
 
     0.899
BDI_1457
Conserved hypothetical protein, putative mannosyltransferase.
 
     0.807
BDI_3098
Putative membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.746
BDI_3018
Hypothetical protein.
  
     0.730
BDI_1209
Conserved hypothetical protein.
  
     0.696
BDI_3486
Conserved hypothetical protein.
  
     0.691
BDI_2997
Conserved hypothetical protein.
  
     0.690
BDI_0531
Conserved hypothetical protein.
  
     0.679
recA
RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
       0.670
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.