Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BDI_0417 | BDI_1690 | Putative outer membrane protein probably involved in nutrient binding. | Putative regulatory protein. | 0.438 |
BDI_1317 | BDI_1690 | Glycoside hydrolase family 78; Distantly related to alpha-L-rhamnosidases. | Putative regulatory protein. | 0.445 |
BDI_1689 | BDI_1690 | Conserved hypothetical protein, putative probable secreted glycosylhydrolase. | Putative regulatory protein. | 0.477 |
BDI_1690 | BDI_0417 | Putative regulatory protein. | Putative outer membrane protein probably involved in nutrient binding. | 0.438 |
BDI_1690 | BDI_1317 | Putative regulatory protein. | Glycoside hydrolase family 78; Distantly related to alpha-L-rhamnosidases. | 0.445 |
BDI_1690 | BDI_1689 | Putative regulatory protein. | Conserved hypothetical protein, putative probable secreted glycosylhydrolase. | 0.477 |
BDI_1690 | BDI_1691 | Putative regulatory protein. | Phosphoglucomutase. | 0.511 |
BDI_1690 | BDI_1692 | Putative regulatory protein. | Conserved hypothetical protein. | 0.511 |
BDI_1690 | BDI_1693 | Putative regulatory protein. | Conserved hypothetical protein, putative exopolyphosphatase-related protein. | 0.416 |
BDI_1690 | BDI_3337 | Putative regulatory protein. | Putative outer membrane protein, probably involved in nutrient binding. | 0.423 |
BDI_1691 | BDI_1690 | Phosphoglucomutase. | Putative regulatory protein. | 0.511 |
BDI_1691 | BDI_1692 | Phosphoglucomutase. | Conserved hypothetical protein. | 0.794 |
BDI_1691 | BDI_1693 | Phosphoglucomutase. | Conserved hypothetical protein, putative exopolyphosphatase-related protein. | 0.648 |
BDI_1692 | BDI_1690 | Conserved hypothetical protein. | Putative regulatory protein. | 0.511 |
BDI_1692 | BDI_1691 | Conserved hypothetical protein. | Phosphoglucomutase. | 0.794 |
BDI_1692 | BDI_1693 | Conserved hypothetical protein. | Conserved hypothetical protein, putative exopolyphosphatase-related protein. | 0.648 |
BDI_1693 | BDI_1690 | Conserved hypothetical protein, putative exopolyphosphatase-related protein. | Putative regulatory protein. | 0.416 |
BDI_1693 | BDI_1691 | Conserved hypothetical protein, putative exopolyphosphatase-related protein. | Phosphoglucomutase. | 0.648 |
BDI_1693 | BDI_1692 | Conserved hypothetical protein, putative exopolyphosphatase-related protein. | Conserved hypothetical protein. | 0.648 |
BDI_3337 | BDI_1690 | Putative outer membrane protein, probably involved in nutrient binding. | Putative regulatory protein. | 0.423 |