STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_1733NADP-dependent malate dehydrogenase. (762 aa)    
Predicted Functional Partners:
BDI_2765
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
 
 
 0.971
fumC
Fumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.965
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
 
 0.962
BDI_3302
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.960
BDI_0711
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.956
BDI_2807
Putative oxidoreductase.
  
 
 0.955
BDI_2683
Pyruvate carboxylase subunit B.
    
 0.954
BDI_0987
Pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
 
 0.948
BDI_2087
Aldehyde dehydrogenase A; Belongs to the aldehyde dehydrogenase family.
  
 
 0.948
BDI_3392
Formate acetyltransferase.
  
 
 0.942
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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