STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_1813NiFe hydrogenase small subunit, HupC. (245 aa)    
Predicted Functional Partners:
BDI_1812
Stable NiFe hydrogenase large subunit.
 
 
 0.997
BDI_1811
Putative uptake hydrogenase small subunit precursor.
 
 
 0.995
BDI_1814
Ni,Fe-hydrogenase maturation factor.
 
  
 0.968
BDI_1810
Hydrogenase expression/formation protein HypE.
 
   
 0.753
BDI_1809
Hydrogenase isoenzymes formation protein; HypD.
  
  
 0.741
hypA
Hydrogenase expression/formation protein HupA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
   
 0.735
BDI_1808
Hydrogenase expression/formation protein; HypC.
  
  
 0.730
BDI_1805
Hydrogenase accessory protein HypB.
 
   
 0.690
BDI_1807
Hydrogenase maturation factor.
     
 0.560
BDI_0398
Putative ferredoxin-type protein.
   
  
 0.485
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.