STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_1857Conserved hypothetical protein. (129 aa)    
Predicted Functional Partners:
BDI_0476
Conserved hypothetical protein.
  
     0.641
BDI_1862
Conserved hypothetical protein.
 
    0.588
BDI_2485
Cell division protein FtsQ.
  
     0.574
BDI_1780
Conserved hypothetical protein.
  
     0.566
BDI_3442
Conserved hypothetical protein.
  
     0.558
BDI_1991
Conserved hypothetical protein.
  
     0.543
BDI_0531
Conserved hypothetical protein.
  
     0.541
BDI_1858
Putative N utilization substance protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.524
BDI_0193
Conserved hypothetical protein.
  
     0.513
BDI_1191
Conserved hypothetical protein.
  
     0.512
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.