STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_1920Putative outer membrane protein, probably involved in nutrient binding. (1028 aa)    
Predicted Functional Partners:
BDI_1921
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.919
BDI_2744
Putative outer membrane protein probably involved in nutrient binding.
 
 
   0.811
BDI_3918
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.809
BDI_0417
Putative outer membrane protein probably involved in nutrient binding.
 
 
   0.807
BDI_1676
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.805
BDI_2468
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.805
BDI_3298
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.763
BDI_0233
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.747
BDI_2315
Putative outer membrane protein probably involved in nutrient binding.
  
 
   0.733
BDI_2524
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.731
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.