STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_1925Conserved hypothetical protein. (301 aa)    
Predicted Functional Partners:
BDI_1927
Conserved hypothetical protein.
 
     0.910
BDI_0096
Glycine betaine transport ATP-binding protein.
  
 
 0.800
BDI_3859
Glycine betaine transport ATP-binding protein.
  
 
 0.800
BDI_1926
Conserved hypothetical protein.
  
    0.769
BDI_0609
Hypothetical protein.
  
     0.740
BDI_0964
Hypothetical protein.
  
     0.723
BDI_1928
Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.716
BDI_0139
Putative cAMP-binding protein.
  
     0.710
BDI_1835
Outer membrane assembly protein.
  
     0.701
BDI_1454
Conserved hypothetical protein.
  
     0.618
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.