STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_1937Putative transport protein. (532 aa)    
Predicted Functional Partners:
BDI_1938
Glycoside hydrolase family 51, candidate alpha-L-arabinofuranosidase.
       0.682
BDI_1939
Conserved hypothetical protein.
       0.624
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
       0.539
BDI_1940
Putative helicase.
       0.443
BDI_1072
Aspartate decarboxylase AsdA.
 
  
 0.435
BDI_1935
Putative permease.
       0.413
BDI_1073
Putative aspartate decarboxylase.
 
  
 0.410
BDI_1934
Conserved hypothetical protein.
       0.408
BDI_1977
Anaerobic C4-dicarboxylate transporter DcuB.
  
     0.403
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.