Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BDI_2001Putative amidohydrolase. (261 aa)    
Predicted Functional Partners:
BDI_0326
Glutamate synthase, large subunit.
    
 0.925
BDI_3804
NAD-specific glutamate dehydrogenase 1; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.924
BDI_3809
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.924
BDI_3682
Putative NADPH-dependent glutamate synthase.
 
 
 0.921
BDI_3033
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
    
 0.912
BDI_0325
Glutamate synthase, small subunit.
  
 
 0.909
BDI_2026
Aspartate aminotransferase.
  
 
 0.907
BDI_3491
Aspartate aminotransferase.
  
 
 0.907
BDI_1075
Isocitrate dehydrogenase.
  
 
  0.824
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.822
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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