STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_2080Putative aminotransferase. (391 aa)    
Predicted Functional Partners:
BDI_2552
O-acetylhomoserine (thiol)-lyase.
   
 0.914
BDI_0970
Putative cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.912
BDI_3768
O-acetylhomoserine (thiol)-lyase.
   
 0.912
BDI_0415
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.911
BDI_3491
Aspartate aminotransferase.
 
  
0.911
BDI_2026
Aspartate aminotransferase.
 
  
0.909
BDI_0982
Putative aminotransferase B.
  
  
 
0.907
BDI_0430
1-aminocyclopropane-1-carboxylate deaminase.
    
  0.904
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
  0.900
BDI_0261
Aspartokinase/homoserine dehydrogenase.
    
 0.820
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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