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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_2201Mannose-6-phosphate isomerase. (448 aa)    
Predicted Functional Partners:
gmd-2
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
 0.985
BDI_1691
Phosphoglucomutase.
  
 
 0.944
gmd
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
 0.940
BDI_0654
Glycosyltransferase.
  
  
 0.933
BDI_1744
Putative glycosyltransferase.
  
  
 0.933
BDI_3306
Mannose-1-phosphate guanylyltransferase.
 
  
 
0.928
BDI_3226
Mannose-6-phosphate isomerase.
 
  
 
0.911
fcl-2
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
  
 0.788
BDI_3832
Capsular polysaccharide biosynthesis protein Cps4K.
  
  
 0.758
BDI_2204
Glycosyltransferase family 2; Related to beta-glycosyltransferases.
  
  
 0.757
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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