Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BDI_2255Acetyl-coenzyme A synthetase. (551 aa)    
Predicted Functional Partners:
BDI_2254
Transcriptional regulator.
  
 0.987
BDI_1391
Ketoisovalerate oxidoreductase subunit VorB.
 
 
 0.939
BDI_1392
Ketoisovalerate oxidoreductase subunit VorA.
 
 
 0.938
BDI_1076
Citrate synthase; Belongs to the citrate synthase family.
  
 0.936
BDI_2807
Putative oxidoreductase.
  
 
 0.936
BDI_0075
propionyl-CoA carboxylase beta chain.
  
 0.918
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 
 0.918
BDI_1804
acetyl-CoA synthetase.
    
 0.916
BDI_0076
Putative biotin carboxylase 1; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.915
BDI_2806
Oxidoreductase, putative.
  
 
 0.913
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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