Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BDI_2602Conserved hypothetical protein. (468 aa)    
Predicted Functional Partners:
BDI_2603
Putative iron-regulated protein A precursor.
 
    0.981
BDI_2601
Conserved hypothetical protein.
 
    0.910
BDI_2604
Conserved hypothetical protein.
 
  
 0.855
BDI_2599
Putative translation initiation inhibitor.
 
    0.799
BDI_2600
Conserved hypothetical protein.
  
    0.766
BDI_2598
Conserved hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
       0.662
BDI_2597
Transcriptional regulator.
       0.638
BDI_1040
Conserved hypothetical protein.
   
    0.524
BDI_3524
Conserved hypothetical protein.
  
     0.474
BDI_0171
Thiamine biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
   
    0.436
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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