STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_3118Conserved hypothetical protein. (573 aa)    
Predicted Functional Partners:
BDI_3120
Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.801
BDI_3119
Hypothetical protein.
       0.783
BDI_3117
Putative outer membrane protein probably involved in nutrient binding.
 
     0.506
BDI_2414
Glycoside hydrolase family 78; Related to alpha-L-rhamnosidases.
  
     0.494
BDI_2340
Conserved hypothetical protein.
  
     0.485
BDI_3116
Putative outer membrane protein probably involved in nutrient binding.
 
     0.476
BDI_3806
Putative endonuclease/exonuclease/phosphatase family protein.
  
     0.433
BDI_0977
Glutaminase A.
  
     0.423
BDI_3012
Acyltransferase.
  
     0.404
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.