STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_3136Putative integrase/transposase; Belongs to the 'phage' integrase family. (315 aa)    
Predicted Functional Partners:
BDI_1266
Site-specific recombinase; Belongs to the 'phage' integrase family.
  
     0.756
BDI_0759
Putative phage integrase; Belongs to the 'phage' integrase family.
  
     0.753
BDI_1257
Tyrosine type site-specific recombinase.
  
     0.652
BDI_3258
Conserved hypothetical protein.
 
   
 0.615
BDI_2974
Site-specific recombinase; Belongs to the 'phage' integrase family.
  
     0.569
BDI_0498
Integrase; Belongs to the 'phage' integrase family.
  
     0.563
BDI_2985
Putative excisionase.
 
   
 0.546
BDI_2235
Conserved hypothetical protein.
 
   
 0.536
BDI_3756
Site-specific recombinase; Belongs to the 'phage' integrase family.
  
     0.517
BDI_3516
Site-specific recombinase; Belongs to the 'phage' integrase family.
  
     0.498
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.