STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaCUronate isomerase. (532 aa)    
Predicted Functional Partners:
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.956
BDI_3185
Putative gluconate aldolase.
 
   
 0.942
BDI_3186
Putative gluconate kinase.
 
   
 0.906
BDI_1564
Glycoside hydrolase family 51, candidate alpha-L-arabinofuranosidase.
  
  
 0.841
BDI_3065
Glycoside hydrolase family 43, candidate beta-glycosidase; central CBM32 module.
 
  
 0.841
BDI_2179
Glycoside hydrolase family 43, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 43 family.
    
 0.819
BDI_1274
Glycoside hydrolase family 51; Related to alpha-L-arabinofuranosidases.
     
 0.818
BDI_1938
Glycoside hydrolase family 51, candidate alpha-L-arabinofuranosidase.
     
 0.818
BDI_0377
Putative oxidoreductase.
 
  
 0.728
BDI_2467
Glycoside hydrolase family 28; Related to polygalacturonases.
 
   
 0.602
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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