Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BDI_3192Putative thioesterase family protein. (137 aa)    
Predicted Functional Partners:
BDI_3193
Putative DNA processing Smf-like protein.
  
    0.834
BDI_3191
Collagenase precursor.
  
    0.823
BDI_0090
Putative inosine-5'-monophosphate dehydrogenase.
     
 0.504
BDI_1760
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.489
BDI_1482
Conserved hypothetical protein.
  
    0.473
fabZ
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
  
 0.471
BDI_0565
Putative acyl carrier protein.
  
 
 0.450
BDI_0568
Putative acyl carrier protein.
  
 
 0.450
BDI_3629
Putative acyl carrier protein.
  
 
 0.450
BDI_2674
Conserved hypothetical protein.
 
   
 0.403
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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