Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BDI_3205Two-component system sensor histidine kinase, with response regulator receiver domain. (1045 aa)    
Predicted Functional Partners:
BDI_1484
Two-component system sensor kinase/response regulator, hybrid.
  
 
 0.976
BDI_3372
Two-component system sensor histidine kinase/response regulator, hybrid.
  
 
 0.976
BDI_0637
Two-component system sensor histidine kinase.
 
 
0.945
BDI_0621
Two-component sensor histidine kinase, with response regulator receiver domain.
 
 
0.923
BDI_1298
Two-component system sensor histidine kinase, with a response regulator receiver domain.
 
 
0.923
BDI_2573
Two-component system sensor histidine kinase.
 
 
0.907
BDI_1396
Putative two-component system sensor histidine kinase.
 
 
0.893
BDI_3474
Two-component system sensor histidine kinase/response regulator, hybrid.
 
 
0.892
BDI_3391
Two-component system sensor histidine kinase/response regulator, hybrid.
 
 
0.889
BDI_1371
Two-component system sensor histidine kinase.
 
 
0.882
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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