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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
BDI_3208Fumarate reductase, iron-sulfur protein. (251 aa)    
Predicted Functional Partners:
BDI_3209
Fumarate reductase, flavoprotein subunit.
 
 0.999
BDI_3210
Putative cytochrome B subunit.
 
 0.999
BDI_2765
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.988
fumC
Fumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.967
BDI_1045
NADH:ubiquinone oxidoreductase subunit.
   
 
 0.958
BDI_1043
NADH:ubiquinone oxidoreductase subunit.
   
 
 0.936
BDI_1076
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.851
BDI_1022
Proline dehydrogenase, alpha subunit.
  
 
 0.821
BDI_2305
Conserved hypothetical protein.
   
 
 0.820
argH
Argininosuccinate lyase.
     
 0.819
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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