STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_3208Fumarate reductase, iron-sulfur protein. (251 aa)    
Predicted Functional Partners:
BDI_3209
Fumarate reductase, flavoprotein subunit.
 
 0.999
BDI_3210
Putative cytochrome B subunit.
 
 
 0.995
BDI_2765
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.987
fumC
Fumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.964
BDI_1045
NADH:ubiquinone oxidoreductase subunit.
   
 
 0.922
BDI_1043
NADH:ubiquinone oxidoreductase subunit.
   
 
 0.858
BDI_1076
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.852
BDI_0398
Putative ferredoxin-type protein.
   
 
 0.827
argH
Argininosuccinate lyase.
     
 0.825
BDI_2026
Aspartate aminotransferase.
   
 
 0.812
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.