Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BDI_3245 | BDI_3246 | Transposase; Belongs to the 'phage' integrase family. | Conserved hypothetical protein. | 0.773 |
BDI_3245 | BDI_3247 | Transposase; Belongs to the 'phage' integrase family. | Mobilization protein BmgA. | 0.810 |
BDI_3245 | BDI_3248 | Transposase; Belongs to the 'phage' integrase family. | Mobilization protein BmgB. | 0.783 |
BDI_3245 | BDI_3249 | Transposase; Belongs to the 'phage' integrase family. | Conserved hypothetical protein. | 0.678 |
BDI_3245 | BDI_3250 | Transposase; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.678 |
BDI_3245 | BDI_3251 | Transposase; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.499 |
BDI_3246 | BDI_3245 | Conserved hypothetical protein. | Transposase; Belongs to the 'phage' integrase family. | 0.773 |
BDI_3246 | BDI_3247 | Conserved hypothetical protein. | Mobilization protein BmgA. | 0.693 |
BDI_3246 | BDI_3248 | Conserved hypothetical protein. | Mobilization protein BmgB. | 0.693 |
BDI_3246 | BDI_3249 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.679 |
BDI_3246 | BDI_3250 | Conserved hypothetical protein. | Hypothetical protein. | 0.678 |
BDI_3246 | BDI_3251 | Conserved hypothetical protein. | Hypothetical protein. | 0.499 |
BDI_3247 | BDI_3245 | Mobilization protein BmgA. | Transposase; Belongs to the 'phage' integrase family. | 0.810 |
BDI_3247 | BDI_3246 | Mobilization protein BmgA. | Conserved hypothetical protein. | 0.693 |
BDI_3247 | BDI_3248 | Mobilization protein BmgA. | Mobilization protein BmgB. | 0.944 |
BDI_3247 | BDI_3249 | Mobilization protein BmgA. | Conserved hypothetical protein. | 0.783 |
BDI_3247 | BDI_3250 | Mobilization protein BmgA. | Hypothetical protein. | 0.773 |
BDI_3247 | BDI_3251 | Mobilization protein BmgA. | Hypothetical protein. | 0.563 |
BDI_3248 | BDI_3245 | Mobilization protein BmgB. | Transposase; Belongs to the 'phage' integrase family. | 0.783 |
BDI_3248 | BDI_3246 | Mobilization protein BmgB. | Conserved hypothetical protein. | 0.693 |
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