STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_3267Conserved hypothetical outer membrane protein. (409 aa)    
Predicted Functional Partners:
BDI_3268
Conserved hypothetical protein.
 
    
0.733
BDI_1307
Putative outer membrane protein probably involved in nutrient binding.
  
     0.591
BDI_0838
Conserved hypothetical protein.
  
     0.578
BDI_0092
Conserved hypothetical protein.
  
     0.557
BDI_0531
Conserved hypothetical protein.
  
     0.557
BDI_1780
Conserved hypothetical protein.
  
     0.542
BDI_3266
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
       0.518
BDI_3018
Hypothetical protein.
  
     0.513
BDI_0922
ABC transporter, ATP-binding protein-related protein.
  
     0.495
BDI_2829
Extracellular protease, putative.
  
     0.489
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.