STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_3352Outer membrane efflux protein. (438 aa)    
Predicted Functional Partners:
BDI_0971
Multidrug efflux pump channel protein.
  
  
  0.924
BDI_0704
Outer membrane protein.
  
  
  0.923
BDI_3572
Putative outer membrane transport/efflux protein.
  
  
 
0.918
BDI_0383
Outer membrane protein oprM precursor.
  
  
  0.917
BDI_1491
Outer membrane protein oprM precursor.
  
  
  0.911
BDI_0684
Conserved hypothetical protein, putative outer membrane efflux protein.
  
  
 
0.910
BDI_0791
Outer membrane protein, putative.
  
  
 
0.909
BDI_0346
Outer membrane efflux protein.
  
  
 
0.905
BDI_0276
Putative multidrug resistance protein.
     
 
0.900
BDI_3353
Periplasmic component of efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.879
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.