Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BDI_3563Sugar phosphate isomerase/epimerase. (330 aa)    
Predicted Functional Partners:
BDI_3562
Putative dehydrogenase.
 
  
 0.945
BDI_3564
Putative phosphohydrolase.
       0.681
BDI_3565
Putative oxidoreductase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.
  
  
 0.512
BDI_3561
Hypothetical protein.
       0.501
BDI_0145
Sugar phosphate isomerase/epimerase.
 
     0.480
BDI_3400
Sugar phosphate isomerase/epimerase.
 
     0.456
BDI_3770
Sugar phosphate isomerase/epimerase.
 
     0.447
BDI_0594
Sugar phosphate isomerase/epimerase.
 
     0.441
BDI_2307
D-tagatose 3-epimerase.
  
     0.429
BDI_1323
Rhamnulose kinase/L-fuculose kinase.
 
  
 0.427
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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