STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDI_3854Conserved hypothetical protein. (216 aa)    
Predicted Functional Partners:
BDI_3855
Conserved hypothetical protein.
       0.718
BDI_3856
Putative sulfate transporter permease.
       0.718
BDI_3857
Glycine betaine-binding protein precursor.
       0.718
BDI_3858
Glycine betaine/L-proline transport system permease.
       0.649
BDI_3859
Glycine betaine transport ATP-binding protein.
       0.604
BDI_2198
Putative transmembrane calcium-transporting ATPase.
  
 
 0.548
BDI_0341
Conserved hypothetical protein.
  
  
 0.527
BDI_1375
Conserved hypothetical protein.
  
  
 0.527
Your Current Organism:
Parabacteroides distasonis
NCBI taxonomy Id: 435591
Other names: P. distasonis ATCC 8503, Parabacteroides distasonis ATCC 8503, Parabacteroides distasonis str. ATCC 8503, Parabacteroides distasonis strain ATCC 8503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.