Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHM87131.1 | EHM88094.1 | HMPREF0045_01835 | HMPREF0045_01205 | Hypothetical protein. | Hypothetical protein. | 0.940 |
EHM87131.1 | EHM88541.1 | HMPREF0045_01835 | HMPREF0045_00754 | Hypothetical protein. | Hypothetical protein. | 0.885 |
EHM87131.1 | EHM88683.1 | HMPREF0045_01835 | HMPREF0045_00896 | Hypothetical protein. | Hypothetical protein. | 0.666 |
EHM87131.1 | EHM88867.1 | HMPREF0045_01835 | HMPREF0045_00665 | Hypothetical protein. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.888 |
EHM87131.1 | EHM89471.1 | HMPREF0045_01835 | HMPREF0045_00136 | Hypothetical protein. | Hypothetical protein. | 0.910 |
EHM87131.1 | ilvA | HMPREF0045_01835 | HMPREF0045_01818 | Hypothetical protein. | Threonine ammonia-lyase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.859 |
EHM88094.1 | EHM87131.1 | HMPREF0045_01205 | HMPREF0045_01835 | Hypothetical protein. | Hypothetical protein. | 0.940 |
EHM88094.1 | EHM88201.1 | HMPREF0045_01205 | HMPREF0045_01040 | Hypothetical protein. | 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.974 |
EHM88094.1 | EHM88541.1 | HMPREF0045_01205 | HMPREF0045_00754 | Hypothetical protein. | Hypothetical protein. | 0.953 |
EHM88094.1 | EHM88683.1 | HMPREF0045_01205 | HMPREF0045_00896 | Hypothetical protein. | Hypothetical protein. | 0.874 |
EHM88094.1 | EHM88867.1 | HMPREF0045_01205 | HMPREF0045_00665 | Hypothetical protein. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.997 |
EHM88094.1 | EHM88868.1 | HMPREF0045_01205 | HMPREF0045_00666 | Hypothetical protein. | Hypothetical protein. | 0.891 |
EHM88094.1 | EHM89471.1 | HMPREF0045_01205 | HMPREF0045_00136 | Hypothetical protein. | Hypothetical protein. | 0.938 |
EHM88094.1 | ilvA | HMPREF0045_01205 | HMPREF0045_01818 | Hypothetical protein. | Threonine ammonia-lyase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.906 |
EHM88094.1 | pepA | HMPREF0045_01205 | HMPREF0045_00376 | Hypothetical protein. | Hypothetical protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.785 |
EHM88201.1 | EHM88094.1 | HMPREF0045_01040 | HMPREF0045_01205 | 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Hypothetical protein. | 0.974 |
EHM88201.1 | EHM88541.1 | HMPREF0045_01040 | HMPREF0045_00754 | 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Hypothetical protein. | 0.950 |
EHM88201.1 | EHM88683.1 | HMPREF0045_01040 | HMPREF0045_00896 | 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Hypothetical protein. | 0.666 |
EHM88201.1 | EHM88867.1 | HMPREF0045_01040 | HMPREF0045_00665 | 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.951 |
EHM88201.1 | EHM89471.1 | HMPREF0045_01040 | HMPREF0045_00136 | 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Hypothetical protein. | 0.932 |
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