STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG04777.1Hypothetical protein. (442 aa)    
Predicted Functional Partners:
SFG04761.1
Cytochrome c.
 
     0.910
SFG05604.1
Outer membrane protein OmpA.
  
 
 0.815
SFG95523.1
Outer membrane protein OmpA.
   
 
 0.789
SFG65633.1
OmpA family protein.
  
   0.707
SFG06703.1
Predicted arabinose efflux permease, MFS family.
 
     0.610
SFG99836.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.
 
    0.608
SFG04721.1
Predicted arabinose efflux permease, MFS family.
 
     0.589
SFG46583.1
Hypothetical protein.
  
     0.578
SFG99897.1
Gluconate 2-dehydrogenase subunit 3.
  
     0.578
SFG84300.1
C-terminal domain of CHU protein family protein.
  
     0.573
Your Current Organism:
Algoriphagus hitonicola
NCBI taxonomy Id: 435880
Other names: A. hitonicola, Algoriphagus hitonicola Copa-Patino et al. 2008 emend. Kim et al. 2014, CCM 7449, CECT 7267, DSM 19315, strain 7-UAH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.