STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG11913.1N-acetylmuramoyl-L-alanine amidase. (266 aa)    
Predicted Functional Partners:
SFG75029.1
Rare lipoprotein A; Belongs to the RlpA family.
 
 0.939
SFG09616.1
Membrane-bound lytic murein transglycosylase D.
 
  
 0.918
SFG85691.1
Membrane-bound lytic murein transglycosylase D.
 
  
 0.910
SFG66232.1
LysM repeat-containing protein.
 
 
 0.875
SFG95287.1
Outer membrane lipoprotein-sorting protein.
    
   0.838
SFG72800.1
Rhomboid family protein.
  
   0.713
SFG72822.1
Membrane associated serine protease, rhomboid family.
  
   0.713
SFG81693.1
Membrane associated serine protease, rhomboid family.
  
   0.713
SFG09696.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
  
 0.664
SFG39212.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
 
  
 0.624
Your Current Organism:
Algoriphagus hitonicola
NCBI taxonomy Id: 435880
Other names: A. hitonicola, Algoriphagus hitonicola Copa-Patino et al. 2008 emend. Kim et al. 2014, CCM 7449, CECT 7267, DSM 19315, strain 7-UAH
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