Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG09616.1 | SFG09696.1 | SAMN04487988_101393 | SAMN04487988_101396 | Membrane-bound lytic murein transglycosylase D. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.631 |
SFG09616.1 | SFG11913.1 | SAMN04487988_101393 | SAMN04487988_101473 | Membrane-bound lytic murein transglycosylase D. | N-acetylmuramoyl-L-alanine amidase. | 0.918 |
SFG09616.1 | SFG39212.1 | SAMN04487988_101393 | SAMN04487988_103222 | Membrane-bound lytic murein transglycosylase D. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.547 |
SFG09616.1 | SFG66232.1 | SAMN04487988_101393 | SAMN04487988_106116 | Membrane-bound lytic murein transglycosylase D. | LysM repeat-containing protein. | 0.642 |
SFG09616.1 | SFG75029.1 | SAMN04487988_101393 | SAMN04487988_107180 | Membrane-bound lytic murein transglycosylase D. | Rare lipoprotein A; Belongs to the RlpA family. | 0.484 |
SFG09616.1 | SFG85691.1 | SAMN04487988_101393 | SAMN04487988_10972 | Membrane-bound lytic murein transglycosylase D. | Membrane-bound lytic murein transglycosylase D. | 0.447 |
SFG09696.1 | SFG09616.1 | SAMN04487988_101396 | SAMN04487988_101393 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Membrane-bound lytic murein transglycosylase D. | 0.631 |
SFG09696.1 | SFG11913.1 | SAMN04487988_101396 | SAMN04487988_101473 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | N-acetylmuramoyl-L-alanine amidase. | 0.664 |
SFG09696.1 | SFG39212.1 | SAMN04487988_101396 | SAMN04487988_103222 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.661 |
SFG11913.1 | SFG09616.1 | SAMN04487988_101473 | SAMN04487988_101393 | N-acetylmuramoyl-L-alanine amidase. | Membrane-bound lytic murein transglycosylase D. | 0.918 |
SFG11913.1 | SFG09696.1 | SAMN04487988_101473 | SAMN04487988_101396 | N-acetylmuramoyl-L-alanine amidase. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.664 |
SFG11913.1 | SFG39212.1 | SAMN04487988_101473 | SAMN04487988_103222 | N-acetylmuramoyl-L-alanine amidase. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.624 |
SFG11913.1 | SFG66232.1 | SAMN04487988_101473 | SAMN04487988_106116 | N-acetylmuramoyl-L-alanine amidase. | LysM repeat-containing protein. | 0.875 |
SFG11913.1 | SFG72800.1 | SAMN04487988_101473 | SAMN04487988_10777 | N-acetylmuramoyl-L-alanine amidase. | Rhomboid family protein. | 0.713 |
SFG11913.1 | SFG72822.1 | SAMN04487988_101473 | SAMN04487988_10778 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.713 |
SFG11913.1 | SFG75029.1 | SAMN04487988_101473 | SAMN04487988_107180 | N-acetylmuramoyl-L-alanine amidase. | Rare lipoprotein A; Belongs to the RlpA family. | 0.939 |
SFG11913.1 | SFG81693.1 | SAMN04487988_101473 | SAMN04487988_108180 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.713 |
SFG11913.1 | SFG85691.1 | SAMN04487988_101473 | SAMN04487988_10972 | N-acetylmuramoyl-L-alanine amidase. | Membrane-bound lytic murein transglycosylase D. | 0.910 |
SFG11913.1 | SFG95287.1 | SAMN04487988_101473 | SAMN04487988_11196 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein-sorting protein. | 0.838 |
SFG39212.1 | SFG09616.1 | SAMN04487988_103222 | SAMN04487988_101393 | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | Membrane-bound lytic murein transglycosylase D. | 0.547 |
page 1 of 3