STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG37016.1ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain. (568 aa)    
Predicted Functional Partners:
SFG37040.1
Multidrug resistance efflux pump.
 0.983
SFG37060.1
Outer membrane protein TolC.
 
 
  0.956
SFG36989.1
Transcriptional regulator, TetR family.
 
     0.944
SFG68460.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.678
SFG37081.1
Uncharacterized conserved protein, DUF1330 family.
       0.642
SFG94016.1
ATP-binding cassette, subfamily B.
  
 
 
0.615
SFG27324.1
ABC transporter, permease/ATP-binding protein.
  
 
 
0.613
SFG86527.1
ATP-binding cassette, subfamily B.
  
 
 
0.608
SFG36953.1
Uncharacterized membrane protein.
       0.594
SFG86236.1
ATP-binding cassette, subfamily B, MsbA.
    
 
0.588
Your Current Organism:
Algoriphagus hitonicola
NCBI taxonomy Id: 435880
Other names: A. hitonicola, Algoriphagus hitonicola Copa-Patino et al. 2008 emend. Kim et al. 2014, CCM 7449, CECT 7267, DSM 19315, strain 7-UAH
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.