STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG60754.1Signal transduction histidine kinase. (460 aa)    
Predicted Functional Partners:
SFG67994.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 0.996
SFG60728.1
Two component transcriptional regulator, winged helix family.
  0.983
SFG59374.1
Response regulator receiver domain-containing protein.
  
 0.928
SFG65295.1
PAS domain S-box-containing protein.
 
0.927
SFG96514.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.895
SFH01592.1
PAS domain S-box-containing protein.
 
 
0.881
SFH06822.1
PAS domain S-box-containing protein.
 
 
 
0.868
SFG36452.1
Response regulator receiver domain-containing protein.
  
  0.859
SFG47169.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.849
SFG21291.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.843
Your Current Organism:
Algoriphagus hitonicola
NCBI taxonomy Id: 435880
Other names: A. hitonicola, Algoriphagus hitonicola Copa-Patino et al. 2008 emend. Kim et al. 2014, CCM 7449, CECT 7267, DSM 19315, strain 7-UAH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.