STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG91538.1Pyridoxal-dependent decarboxylase conserved domain-containing protein. (418 aa)    
Predicted Functional Partners:
SFG24706.1
Glutamate synthase (NADH) large subunit.
     
 0.888
SFG29484.1
Glutamate or tyrosine decarboxylase.
  
  
 
0.853
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
  0.844
SFG45991.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
  0.817
SFG82022.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
  0.817
SFG91560.1
Adenylyltransferase and sulfurtransferase.
  
    0.725
SFG91574.1
Molybdopterin synthase sulfur carrier subunit.
       0.723
SFG91548.1
Molybdopterin synthase catalytic subunit.
       0.723
SFG52258.1
aromatic-L-amino-acid decarboxylase.
  
  
  0.707
SFG03790.1
Phenylalanine 4-hydroxylase.
    
 0.618
Your Current Organism:
Algoriphagus hitonicola
NCBI taxonomy Id: 435880
Other names: A. hitonicola, Algoriphagus hitonicola Copa-Patino et al. 2008 emend. Kim et al. 2014, CCM 7449, CECT 7267, DSM 19315, strain 7-UAH
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