STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG94169.1Surface antigen. (568 aa)    
Predicted Functional Partners:
SFG94068.1
Peptidyl-prolyl cis-trans isomerase SurA.
 
 
 0.790
SFG94186.1
Protein of unknown function.
       0.790
SFG07878.1
Hypothetical protein.
  
     0.774
SFH07001.1
Hypothetical protein.
  
     0.774
SFG07903.1
Peptidase family C25.
  
     0.758
SFG08563.1
Hypothetical protein.
  
     0.748
SFG94201.1
uroporphyrinogen-III synthase.
  
    0.717
SFG45309.1
Hypothetical protein.
  
     0.707
SFG46737.1
Hypothetical protein.
   
 
 0.703
SFG71145.1
PQQ-like domain-containing protein.
   
 
 0.703
Your Current Organism:
Algoriphagus hitonicola
NCBI taxonomy Id: 435880
Other names: A. hitonicola, Algoriphagus hitonicola Copa-Patino et al. 2008 emend. Kim et al. 2014, CCM 7449, CECT 7267, DSM 19315, strain 7-UAH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.