STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrBPeptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. (138 aa)    
Predicted Functional Partners:
msrA-2
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.986
SFG48204.1
Thiol:disulfide interchange protein DsbD.
    
 
 0.845
SFH04317.1
Penicillin amidase.
       0.668
rplT
LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.607
rplK
LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.577
rplQ
LSU ribosomal protein L17P.
    
   0.577
rplU
LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
    
   0.577
rpmA
Large subunit ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
    
   0.577
rpmB
LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.
    
   0.577
rpmG
Large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
   0.577
Your Current Organism:
Algoriphagus hitonicola
NCBI taxonomy Id: 435880
Other names: A. hitonicola, Algoriphagus hitonicola Copa-Patino et al. 2008 emend. Kim et al. 2014, CCM 7449, CECT 7267, DSM 19315, strain 7-UAH
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.