STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH13949.1Sugar phosphate isomerase/epimerase. (350 aa)    
Predicted Functional Partners:
SFH13966.1
Predicted dehydrogenase.
 
    0.944
SFH13933.1
Cytochrome c.
       0.724
SFH13917.1
Protein of unknown function.
       0.710
SFH14018.1
Choline dehydrogenase.
 
     0.702
SFG38233.1
Predicted dehydrogenase.
 
    0.666
SFH14036.1
Gluconate 2-dehydrogenase subunit 3.
 
     0.635
SFH14002.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
  
  0.600
SFH13985.1
Nucleoside transporter.
 
    0.562
SFG20037.1
Choline dehydrogenase.
 
     0.534
SFG13716.1
Choline dehydrogenase.
 
     0.517
Your Current Organism:
Algoriphagus hitonicola
NCBI taxonomy Id: 435880
Other names: A. hitonicola, Algoriphagus hitonicola Copa-Patino et al. 2008 emend. Kim et al. 2014, CCM 7449, CECT 7267, DSM 19315, strain 7-UAH
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.