Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG37513.1 | SFG37534.1 | SAMN04487988_103153 | SAMN04487988_103154 | 3-oxoacid CoA-transferase subunit B. | 3-oxoacid CoA-transferase subunit A. | 0.999 |
SFG37513.1 | SFH14996.1 | SAMN04487988_103153 | SAMN04487988_1218 | 3-oxoacid CoA-transferase subunit B. | Protein of unknown function. | 0.529 |
SFG37534.1 | SFG37513.1 | SAMN04487988_103154 | SAMN04487988_103153 | 3-oxoacid CoA-transferase subunit A. | 3-oxoacid CoA-transferase subunit B. | 0.999 |
SFG37534.1 | SFH14996.1 | SAMN04487988_103154 | SAMN04487988_1218 | 3-oxoacid CoA-transferase subunit A. | Protein of unknown function. | 0.529 |
SFH14996.1 | SFG37513.1 | SAMN04487988_1218 | SAMN04487988_103153 | Protein of unknown function. | 3-oxoacid CoA-transferase subunit B. | 0.529 |
SFH14996.1 | SFG37534.1 | SAMN04487988_1218 | SAMN04487988_103154 | Protein of unknown function. | 3-oxoacid CoA-transferase subunit A. | 0.529 |
SFH14996.1 | SFH15013.1 | SAMN04487988_1218 | SAMN04487988_1219 | Protein of unknown function. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.506 |
SFH15013.1 | SFH14996.1 | SAMN04487988_1219 | SAMN04487988_1218 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Protein of unknown function. | 0.506 |