STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN83664.1AMP-binding enzyme family protein. (565 aa)    
Predicted Functional Partners:
ALN83663.1
Alpha/beta hydrolase fold family protein.
 
 
 0.997
ALN85959.1
Amino acid adenylation domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
0.950
ALN83666.1
Polysaccharide biosynthesis family protein.
 
 
 0.939
dltA
D-alanine--poly(phosphoribitol) ligase, subunit 1.
  
 
0.900
fabH
3-oxoacyl-synthase III.
 
   
 0.876
ALN85954.1
Amino acid adenylation domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.855
dhbF
Dimodular nonribosomal peptide synthase; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
0.800
ALN84884.1
Saccharopine dehydrogenase family protein.
 
 
 0.690
ubiB
2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.
 
    0.625
ALN83668.1
SCP-2 sterol transfer family protein.
       0.531
Your Current Organism:
Lysobacter capsici
NCBI taxonomy Id: 435897
Other names: DSM 19286, KCTC 22007, L. capsici, Lysobacter capsici Park et al. 2008, Lysobacter sp. YC5194, strain YC5194
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