Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ALN85280.1NAD(P)-binding Rossmann-like domain protein. (567 aa)    
Predicted Functional Partners:
ALN85279.1
Zinc-binding dehydrogenase family protein.
 
     0.813
ALN85283.1
Amino acid adenylation domain protein; [Q] COG3321 Polyketide synthase modules and related proteins.
 
     0.701
ALN85281.1
Flavin containing amine oxidoreductase family protein.
 
    
0.647
ALN86586.1
Hypothetical protein.
  
  
 0.548
ALN85278.1
Sugar (and other) transporter family protein.
       0.519
ALN86220.1
FAD binding domain protein.
 
  
 0.487
ALN84054.1
Hypothetical protein.
  
     0.486
ALN85282.1
Flavin containing amine oxidoreductase family protein.
 
    
0.484
ALN87410.1
RHS Repeat family protein.
  
     0.483
ALN83858.1
Subtilase family protein.
  
     0.478
Your Current Organism:
Lysobacter capsici
NCBI taxonomy Id: 435897
Other names: DSM 19286, KCTC 22007, L. capsici, Lysobacter capsici Park et al. 2008, Lysobacter sp. YC5194, strain YC5194
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