STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN86466.1Zinc-ribbon domain protein. (124 aa)    
Predicted Functional Partners:
ALN86465.1
Polymer-forming cytoskeletal family protein.
       0.854
ALN86467.1
Hypothetical protein.
       0.662
ALN86460.1
Carboxyl transferase domain protein.
       0.405
ALN86461.1
Hsc62, Hsp70 family chaperone, binds to RpoD and inhibits transcription; Belongs to the heat shock protein 70 family.
       0.400
ALN86462.1
dnaJ domain protein.
       0.400
ALN86463.1
dnaJ domain protein.
       0.400
ALN86464.1
dnaJ domain protein.
       0.400
Your Current Organism:
Lysobacter capsici
NCBI taxonomy Id: 435897
Other names: DSM 19286, KCTC 22007, L. capsici, Lysobacter capsici Park et al. 2008, Lysobacter sp. YC5194, strain YC5194
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.