Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ALN86470.1feoA domain protein. (82 aa)    
Predicted Functional Partners:
feoB
[P] COG0370 Fe2+ transport system protein B.
 
  
 0.991
ALN86468.1
Hypothetical protein.
       0.709
ALN86471.1
enoyl-CoA hydratase/isomerase family protein.
       0.591
ALN87155.1
tonB dependent receptor family protein.
  
   
 0.424
ALN85433.1
Glycine zipper 2TM domain protein.
  
     0.416
ALN86400.1
Hypothetical protein; [R] COG3042 Putative hemolysin.
  
     0.402
Your Current Organism:
Lysobacter capsici
NCBI taxonomy Id: 435897
Other names: DSM 19286, KCTC 22007, L. capsici, Lysobacter capsici Park et al. 2008, Lysobacter sp. YC5194, strain YC5194
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